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Class: Publications

Information about any publications associated with the dataset

URI: bia_mifa_models:Publications

classDiagram class Publications Publications : publication_authors Publications : publication_doi Publications : publication_title Publications : publication_year Publications : pubmed_id

Slots

Name Cardinality and Range Description Inheritance
publication_title 1..1
String		 The title for a publication associated to the dataset direct
publication_authors 1..1
String		 Authors of associated publication direct
publication_doi 1..1
Uriorcurie		 Digital Object Identifier (DOI) direct
publication_year 0..1
String		 Year of publication direct
pubmed_id 0..1
Uriorcurie		 Identifier for journal articles/abstracts in PubMed direct

Usages

used by used in type used
Study publications range Publications
PublicationsCollection publications range Publications

Identifier and Mapping Information

Valid ID Prefixes

Instances of this class should have identifiers with one of the following prefixes:

  • DOI

Schema Source

  • from schema: https://w3id.org/BioImage-Archive/bia-mifa-models

Mappings

Mapping Type Mapped Value
self bia_mifa_models:Publications
native bia_mifa_models:Publications

LinkML Source

Direct

name: Publications
id_prefixes:
- DOI
description: Information about any publications associated with the dataset
from_schema: https://w3id.org/BioImage-Archive/bia-mifa-models
slots:
- publication_title
- publication_authors
- publication_doi
- publication_year
- pubmed_id

Induced

name: Publications
id_prefixes:
- DOI
description: Information about any publications associated with the dataset
from_schema: https://w3id.org/BioImage-Archive/bia-mifa-models
attributes:
  publication_title:
    name: publication_title
    description: The title for a publication associated to the dataset
    examples:
    - value: An annotated fluorescence image dataset for training nuclear segmentation
        methods
    - value: 'Deep Mouse: An End-to-End Auto-Context Refinement Framework for Brain
        Ventricle & Body Segmentation in Embryonic Mice Ultrasound Volumes'
    from_schema: https://w3id.org/BioImage-Archive/bia-mifa-models
    rank: 1000
    slot_uri: schema:title
    alias: publication_title
    owner: Publications
    domain_of:
    - Publications
    range: string
    required: true
  publication_authors:
    name: publication_authors
    description: Authors of associated publication
    examples:
    - value: Truman Grayson, Josiah Carberry
    - value: J. Perez, F. Fulan, J. Doe, W. Wu and J. Novak
    from_schema: https://w3id.org/BioImage-Archive/bia-mifa-models
    rank: 1000
    slot_uri: schema:author
    alias: publication_authors
    owner: Publications
    domain_of:
    - Publications
    range: string
    required: true
  publication_doi:
    name: publication_doi
    description: Digital Object Identifier (DOI)
    examples:
    - value: DOI:10.1242/jcs.033340
    - value: DOI:10.1242/jcs.174946
    from_schema: https://w3id.org/BioImage-Archive/bia-mifa-models
    rank: 1000
    slot_uri: WIKIDATA_PROPERTY:P356
    identifier: true
    alias: publication_doi
    owner: Publications
    domain_of:
    - Publications
    range: uriorcurie
    required: true
  publication_year:
    name: publication_year
    description: Year of publication
    examples:
    - value: '2021'
    - value: '1986'
    from_schema: https://w3id.org/BioImage-Archive/bia-mifa-models
    rank: 1000
    alias: publication_year
    owner: Publications
    domain_of:
    - Publications
    range: string
  pubmed_id:
    name: pubmed_id
    description: Identifier for journal articles/abstracts in PubMed
    examples:
    - value: PMID:18492790
    - value: PMID:26136366
    from_schema: https://w3id.org/BioImage-Archive/bia-mifa-models
    rank: 1000
    slot_uri: WIKIDATA_PROPERTY:P698
    alias: pubmed_id
    owner: Publications
    domain_of:
    - Publications
    range: uriorcurie